Table 3 Virulence gene profiles and phylogeny groups in ExPEC isolates ( n = 48) and their distribution in marinated and non-marinated poultry meat at Finnish retail market
From: Extraintestinal pathogenic Escherichia coli in poultry meat products on the Finnish retail market
Combinations of genes | Phylogeny group | Non-marinated meat (n = 40) | Marinated meat (n = 167) |
|---|---|---|---|
cva, vat, iucD, papC, irp2, iss, kpsMt K1 | B2svg+ | 0 | 2 |
cva, vat, tsh, iucD, irp2, iss, ibeA, kpsMT K1 | B2 | 0 | 3 |
cva, vat, tsh, iucD, papC, iss, astA | D | 0 | 1 |
cva, iucD, irp2, iss, astA, kpsMt K1 | D | 1 | 0 |
cva, iucD, irp2, astA, kpsMt K1 | D | 0 | 1 |
vat, iucD, papC, irp2, iss, astA, kpsMT K1 | D | 1 | 0 |
iucD, papC, irp2, iss, astA, kpsMT K1 | D | 0 | 6 |
iucD, irp2, iss, astA, kpsMT K1 | D | 2 | 4 |
iucD, irp2, astA, kpsMT K1 | D | 3 | 17 |
iucD, iss, astA, kpsMT K1 | D | 0 | 2 |
iucC, papC, irp2, iss | B2 | 2 | 0 |
iucC, irp2, kpsMT K1 | D | 1 | 0 |
iucD, papC | B2 and D | 0 | 2 |
negative | various | 30 | 129 |