Table 1 Oligonucleotide probes targeting bacterial 16S rRNA and 18S rRNA of fungi and algae used for fluorescence in situ hybridization
Target | Name | Target sequence (5′–3′) | Labelling | Target region |
|---|---|---|---|---|
Domain bacteria | S-D-Eub-338 | 5′ gct gcc tcc cgt agg agt 3´ | FITC | 16S |
Fungi | D223_Svampe_Gen | 5′ cca ccc act tag agc tgc 3′ | Cy3 | 18S |
Chlorofyl algae | CHLO | 5′ gtg gtg gtc cgc acc tcg 3′ | Cy3 | 18S |
Kluyveromyces marxianus groupa | Kluyv_620 | 5′ gaa aac cag tgc gcg aca t 3′ | Cy3 | 18S |