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Table 2 Differentially expressed proteins found in both analysis methods

From: Protein profiling of testicular tissue from boars with different levels of hyperactive sperm motility

Contrast

UniProt ID

Protein name

q-value

P-value

FC D

FC P

Gene name

i

K9J4L8

Protein kinase C

0.03

0.0004

− 1.01

− 1.26

PRKCB

i

F1SJ00

LisH domain-containing protein

0.03

0.0005

− 1.97

− 2.5

DCAF1

i

A0A286ZNB8

Lysophospholipase-like protein 1 isoform a

0.005

0.01

0.87

0.89

LYPLAL1

i

F1SR79

J domain-containing protein

0.03

0.01

− 0.78

− 0.81

DNAJB2

i

F1RWP6

Sphingosine kinase 1 isoform 2

0.01

0.02

0.86

0.78

SPHK1

i

F1SDG0

Uncharacterized protein

6.4e−05

0.02

− 1.37

− 1.12

SF3B4

i

F1SNT1

Uncharacterized protein

0.04

0.02

− 0.69

− 0.66

ACAD11

i

F1S5S7

Inactive hydroxysteroid dehydrogenase-like protein 1 isoform X1

0.04

0.03

− 1.06

− 1.06

HSDL1

i

F1SKJ8

Parvalbumin alpha

0.03

0.03

− 1.62

− 0.95

PVALB

ii

A0A287BAZ5

Uncharacterized protein

0.05

0.0003

− 0.7

− 0.74

ACTN4

ii

I3LFS1

Uncharacterized protein

0.02

0.004

− 0.9

− 0.87

USP39

ii

F2Z5T8

Uncharacterized protein

7.0e−08

0.007

− 2.72

− 2.38

MOBKL3

ii

A0A287B5H5

Tubulin alpha chain

0.03

0.009

− 0.94

− 0.99

TUBA8

ii

F1SFI7

Alpha-2-HS-glycoprotein

0.05

0.01

1.01

0.93

AHSG

  1. Common proteins using the two analysis methods for contrast (i) and (ii) with UniProt ID, protein name, q-value for DEP, p-value for Perseus, fold change (FC) for DEP (D) and Perseus (P) and corresponding gene name