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Table 1 Comparison of Expression Ratios for Selected Clones Between Con A Experiments 2 and 3.

From: Generation of EST and cDNA Microarray Resources for the Study of Bovine Immunobiology*

 

Con A-2

Con A-3

Clone Name

Cy5/Cy3 Ratio

P-value

Cy5/Cy3 Ratio

P-value

BOTL0100001XC05R

1.501

0.01080

7.002

0.00083←

BOTL0100001XE05R

9.355

0.00484

13.519

0.00520

BOTL0100003XA09R

9.984

0.02492

10.604

0.01185

BOTL0100003XA10R

7.614

0.02355

5.921

0.00597

BOTL0100003XE01R

9.395

0.00251

47.856

0.02918

BOTL0100005XC11R

7.764

0.00656

7.608

0.00484

BOTL0100006XB03R

16.025

0.00297

5.889

0.02367

BOTL0100006XB04R

4.809

0.01626

5.151

0.91123*

BOTL0100006XH09R

12.124

0.00883

6.040

0.00166

BOTL0100008_B05

19.913

0.01596

5.972

0.00890

BOTL0100008_B07

15.584

0.00111

9.796

0.00503

BOTL0100008_B09

15.879

0.00038

5.376

0.00445

BOTL0100008_F06

6.932

0.00048

9.102

0.09979

BOTL0100008_F09

13.663

0.00347

6.096

0.01826

BOTL0100009_D04

7.862

0.00074

12.623

0.00236

BOTL0100009_E09

3.069

0.00629

15.871

0.47522*

BOTL0100009_G07

11.184

0.00438

9.852

0.03447

BOTL0100009_G08

9.827

0.00365

6.983

0.05161

BOTL0100010_C06

5.247

0.00873

10.422

0.01275

BOTL0100010_D08

1.163

0.01488

8.258

0.00842←

BOTL0100010_G05

15.948

0.00502

11.281

0.01831

MMP15

5.927

0.01560

6.803

0.01387

scavenger R

4.809

0.00440

8.774

0.06362

TIMP3

6.425

0.00350

5.202

0.02316

uPAR

7.860

0.00235

6.321

0.01486

  1. Data for Con A Experiment 3 was filtered to show only those clones whose average expression ratio was ≥ 5. The resulting list of clones was used to parse matching clone data from Con A Experiment 2 using an outjoin comparison in Microsoft Access. The resulting data was organized to show Clone name, average expression ratio for Con A Experiments 2 and 3, along with the associated P-values from the Student's 2-tailed t-test. Clones showing different expression ratio trends between the 2 experiments are indicated by a solid arrow (←) to the right of Table 1. Clones exhibiting at least one P-value > 0.1 are indicated by an asterisk (*) to the right of Table 1.
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Acta Veterinaria Scandinavica

ISSN: 1751-0147