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Table 3 Comparison of N-terminal amino acid sequences isolated from fallow deer with those inferred from DNA databases

From: Identification of pregnancy-associated glycoproteins and alpha-fetoprotein in fallow deer (Dama dama) placenta

Protein

Accession number

1

2

3

4

5

6

7

8

9

10

11

12

13

14

15

Amino acid identity (Id)

fdPAG62kDa_A

C0HJC7

Y

Q

K

S

S

P

G

S

N

I

T

T

    

DeerPAG-1

Q6R6P2

Y

K

T

S

S

P

G

S

N

I

T

T

   

10/12 (83%)

DeerPAG-2

Q6R6P1

Y

K

T

S

S

P

G

S

N

I

A

A

   

8/12 (67%)

fdPAG56kDa_B

C0HJC8

Y

Q

T

S

S

P

G

S

N

I

T

I

G

P

L

 

DeerPAG-1

Q6R6P2

Y

K

T

S

S

P

G

S

N

I

T

T

H

P

L

12/15 (80%)

Predict ovPAG-1 like

XP_004019614.1

S

Q

I

S

S

R

G

S

N

I

T

I

H

P

L

11/15 (73%)

boPAG-5

O46493

S

Q

I

S

S

R

G

S

N

I

T

I

H

P

L

11/15 (73%)

buPAG-10

E3UMT6

S

Q

I

S

S

R

G

S

N

I

T

I

H

P

L

11/15 (73%)

DeerPAG-2

Q6R6P1

Y

K

T

S

S

P

G

S

N

I

A

A

Y

P

L

11/15 (73%)

boPAG-17

Q9TTV7

S

Q

I

S

S

R

G

S

N

L

T

I

H

P

L

10/15 (67%)

fdPAG39kDa_C

C0HJC9

D

V

G

P

S

T

L

A

N

N

      

boPAG-6

O46494

I

V

G

P

S

T

L

V

N

N

     

8/10 (80%)

boPAG-4

O46492

I

V

G

P

S

T

L

V

N

N

     

8/10 (80%)

ovPAG-1

XP_004019891.1

I

Q

G

P

S

T

L

V

N

N

     

7/10 (70%)

fdPAG56kDa_D

C0HJD0

S

L

R

K

M

H

A

L

G

E

T

     

boPAG-12

O46500

P

L

R

K

M

K

T

L

R

E

T

    

7/11 (64%)

Alpha-fetoprotein

C0HJD1

I

P

L

D

T

I

A

G

Y

K

E

     

Ovine alpha-fetoprotein

NP_001009802.1

I

P

L

D

P

I

A

G

Y

K

E

    

10/11 (91%)

Bovine alpha-fetoprotein

NP_776409.1

I

P

L

D

P

V

A

G

Y

K

E

    

9/11 (82%)

Yak alpha-fetoprotein

ELR45247.1

I

P

L

D

P

V

A

G

Y

K

E

    

9/11 (82%)

Albumin

C0HJD2

D

T

H

K

S

E

I

A

H

R

      

Bovine albumin

AAA51411.1

D

T

H

K

S

E

I

A

H

R

     

10/10 (100%)

Caprine albumin

P85295

D

T

H

K

S

E

I

A

H

R

     

10/10 (100%)

  1. fd, Fallow deer; Deer, White-tailed deer; bo, Bovine; ov, Ovine; bu, Water buffalo.
  2. N-terminal amino acid sequences were submitted to Swiss-Prot data bank. Fallow deer pregnancy-associated glycoproteins (fdPAG), alpha-fetoprotein and albumin were aligned with purified proteins or polypeptide precursors deduced from DNA databases. Boldface letters indicate divergence in amino acid regarding the fallow deer protein.